AJB Primer Notes & Protocols in the Plant Sciences is an online-only section of the American Journal of Botany (AJB) intended to promote rapid dissemination of protocols used in genetic analyses of plants. Subjects appropriate for this section include: (1) marker notes providing primer sequences for microsatellite or other markers in particular taxa, and (2) protocol notes describing new methods for isolating, visualizing, or scoring genetic markers. Protocol notes are expected to provide evidence that the new protocol increases the accuracy or reproducibility of marker scoring, decreases the time or expense of marker scoring, or provides the ability to score new classes of markers.
For primer notes, the intent is to demonstrate the usefulness of newly developed primers for subsequent, more detailed studies. Sampling distribution and numbers will depend on the life history characteristics of the organism under study, but sample sizes should be adequate to support the genetic parameters presented. For example, sample sizes are expected to be greater for abundant and widely distributed species than for rare species. Whenever possible, the use of data from multiple populations is encouraged to capture a wider range of potential variation. Although most primers are expected to exhibit polymorphism, monomorphic primers are also acceptable because they may be useful in other populations or related taxa. Given the limited sampling and biological characteristics of some species (small population sizes, recent colonization, admixture, clonality, etc.), tests of linkage disequilibrium and Hardy-Weinberg equilibrium are not required for primer notes articles but are instead reserved for later in-depth population surveys.
From American Journal of Botany 98(10): 2011
Racquel A. Kriedt, Aline M. C. Ramos-Fregonezi, Luciano B. Beheregaray, Sandro L. Bonatto, and Loreta B. Freitas
Am. J. Bot. 2011 98: e277-e279. Published online 22 September, 2011; doi:10.3732/ajb.1100178 [Abstract][Full Text][PDF]
Eric S. J. Harris and Matthew R. Klooster
Am. J. Bot. 2011 98: e293-e295. Published online 22 September, 2011; doi:10.3732/ajb.1100190 [Abstract][Full Text][PDF]
Mario Vallejo-Marín, Lislie Solis-Montero, Cecile F. E. Bacles, and Olivier Lepais
Am. J. Bot. 2011 98: e296-e299. Published online October 2011; doi:10.3732/ajb.1100159 [Abstract][Full Text][PDF]
Yuppayao Kophimai, Carolina Cornejo, Markus Peintinger, Ariel Bergamini, and Christoph Schidegger
Am. J. Bot. 2011 98: e290-e292. Published online 16 September, 2011; doi:10.3732/ajb.1100144 [Abstract][Full Text][PDF]
A. Jesús Muñoz-Pajares, M. Belén Herrador, Mohamed Abdelaziz, F. Xavier Picó, Timothy F. Sharbel, José M. Gómez, and Francisco Perfectti
Am. J. Bot. 2011 98: e287-e289. Published online 22 September, 2011; doi:10.3732/ajb.1100181 [Abstract][Full Text][PDF]
Jinghu Jiang, Jing Wang, Ming Kang, Wei Sun, and Hongwen Huangand
Am. J. Bot. 2011 98: e284-e286. Published online 22 September, 2011; doi:10.3732/ajb.1100221 [Abstract][Full Text][PDF]
Glyn M. Figueira, Miklos Maximiliano Bajay, Carolina M. S. Silva, Maria I. Zucchi, Mariza Monteiro, and Marili V. N. Rodrigues
Am. J. Bot. 2011 98: e282-e283. Published online October 2011; doi:10.3732/ajb.1100221 [Abstract][Full Text][PDF]
Ari Novy and Kenneth C. Jones
Am. J. Bot. 2011 98: e280-e281. Published online 16 September 2011; doi:10.3732/ajb.1100196 [Abstract][Full Text][PDF]
From American Journal of Botany 98(5): 2010
Lee Hong Tnah, Chai Ting Lee, Soon Leong Lee, Kevin Kit Siong Ng, Chin Hong Ng, and Siaw San Hwang
Am. J. Bot. 2011 98: e130-e132. Published online May 2, 2011; doi:10.3732/ajb.1000469 [Abstract][Full Text][PDF]
Inga M. Michalczyk, Claudia Schumacher, Christina Mengel, Ilona Leyer, and Sascha Liepelt
Identification and characterization of 12 microsatellite loci in Cnidium dubium (Apiaceae) using next-generation sequencing
Am. J. Bot. 2011 98: e127-e129. Published online May 2, 2011; doi:10.3732/ajb.1000429 [Abstract][Full Text][PDF]
Ai-Hong Yang, Jin-Ju Zhang, Xiao-Hong Yao, and Hong-Wen Huang
Am. J. Bot. 2011 98: e123-e126. Published online May 11, 2011; doi:10.3732/ajb.1000532 [Abstract][Full Text][PDF]
Chloé E. L. Delmas, Emeline Lhuillier, André Pornon, and Nathalie Escaravage
Am. J. Bot. 2011 98: e120-e122. Published online May 11, 2011; doi:10.3732/ajb.1000533 [Abstract][Full Text][PDF]
Cheng Choon Ang, Soon Leong Lee, Chai Ting Lee, Lee Hong Tnah, Rozainah Mohamad Zakaria, and Ching Ching Ng
Am. J. Bot. 2011 98: e117-e119. Published online May 2, 2011; doi:10.3732/ajb.1000494 [Abstract][Full Text][PDF]
Uploaded January 21, 2011 AJB Advance Access
Zhi-Hua Wu, Shu-Zhen Wang, Ji-Hong Hu, Feng Li, Wei-Dong Ke, and Yi Ding
Am. J. Bot. published online January 21, 2011, doi:10.3732/ajb.1000434 [Abstract][PDF]
En-Wei Tian, Hui Yu, Da-Yong Zhang, and John D. Nason
Am. J. Bot. published online January 21, 2011, doi:10.3732/ajb.1000432 [Abstract][PDF]
Sylvie V. M. Tesson, Marco Borra, Wiebe H. C. F. Kooistra, and Gabriele Procaccini
Am. J. Bot. published online January 21, 2011, doi:10.3732/ajb.1000430 [Abstract][PDF]
Susanne Schreiter, Susan K. Ebeling, and Walter Durka
Am. J. Bot. published online January 21, 2011, doi:10.3732/ajb.1000417 [Abstract][PDF]
Uploaded January 5, 2011 AJB Advance Access
Mariela C. Núñez-Ávila, María Uriarte, Pablo A. Marquet, and Juan J. Armesto
Am. J. Bot. published online January 5, 2011, doi:10.3732/ajb.1000425 [Abstract][PDF]
Yu Ma, Tao Yang, Jianping Guan, Shumin Wang, Haifei Wang, Xuelian Sun, and Xuxiao Zong
Am. J. Bot. published online January 5, 2011, doi:10.3732/ajb.1000407 [Abstract][PDF]
Kelsey L. Glennon and Sheri A. Church
Am. J. Bot. published online January 5, 2011, doi:10.3732/ajb.1000294 [Abstract][PDF]
Uploaded December 30, 2010 AJB Advance Access
Annika M. Moe and George D. Weiblen
Am. J. Bot. published online December 30, 2010, doi:10.3732/ajb.1000412 [Abstract][PDF]
Lin Li, Fang-Yun Cheng, and Qi-Xiang Zhang
Am. J. Bot. published online December 30, 2010, doi:10.3732/ajb.1000410 [Abstract][PDF]
From American Journal of Botany 97(12): 2010
Fangming Zhang, Tao Su, Ying Yang, Yanhong Zhai, Yunheng Ji, and Shaotian Chen
Am. J. Bot. 2010 97: e159-e161. Published online November 15, 2010; doi:10.3732/ajb.1000377 [Abstract][Full Text][PDF]
Ye Sun, Yi-Fei Liu, Jing Wang, Yong Guo, and Hong-Wen Huang
Am. J. Bot. 2010 97: e157-e158. Published online November 15, 2010; doi:10.3732/ajb.1000332 [Abstract][Full Text][PDF]
Isolation and characterization of polymorphic microsatellite loci in Camellia nitidissima Chi (Theaceae)
Am. J. Bot. 2010 97: e89-e90. Published online September 10, 2010; doi:10.3732/ajb.1000234 [Abstract][Full Text][PDF]
Nabeeh A. Hasan, Klaus Mummenhoff, Carlos F. Quiros, C. David Tay, and C. Donovan Bailey
Am. J. Bot. 2010 97: e85-e88. Published online September 16, 2010; doi:10.3732/ajb.1000225 [Abstract][Full Text][PDF]
From American Journal of Botany 97(9): 2010
Gustavo M. Mori, Maria I. Zucchi, Iracilda Sampaio, and Anete P. Souza
Shu-Zhen Wang, Lei Pan, Kan Hu, Chan-You Chen, and Yi Ding
Am. J. Bot. 2010 97: e75-e78. Published online July 26, 2010; doi:10.3732/ajb.1000153 [Abstract][Full Text][PDF]
Lorena B. Parra Gonzalez, Shannon C. K. Straub, Jeff J. Doyle, Paula E. Mora Ortega, Haroldo E. Salvo Garrido, and Iván J. Maureira Butler
Development of microsatellite markers in Lupinus luteus (Fabaceae) and cross-species amplification in other lupine species
Am. J. Bot. 2010 97: e72-e74. Published online July 26, 2010; doi:10.3732/ajb.1000170 [Abstract][Full Text][PDF]
From American Journal of Botany 97(7): 2010
Ya-Ming Gong, Sheng-Chun Xu, Wei-Hua Mao, Qi-Zan Hu, Gu-Wen Zhang, Ju Ding, and Ze-Yun Li
Am. J. Bot. 2010 97: e69-e71. Published online June 22, 2010; doi:10.3732/ajb.1000166 [Abstract][Full Text][PDF]
Dirk U. Bellstedt, Michael D. Pirie, J. Christiaan Visser, Margaret J. de Villiers, and Berit Gehrke
Am. J. Bot. 2010 97: e65-e68. Published online July 1, 2010; doi:10.3732/ajb.1000181 [Abstract][Full Text][PDF]
Glyn M. Figueira, Pamela R. Ramelo, Daniela C. Ogasawara, Ilio Montanari, Jr., Maria I. Zucchi, Marcelo M.Cavallari, and Mary A. Foglio
Am. J. Bot. 2010 97: e63-e64. Published online June 22, 2010; doi:10.3732/ajb.1000145 [Abstract][Full Text][PDF]
Xiao-Yi Li, Zheng-Feng Wang, Peng Zhu, Wan-Hui Ye, Xiao-Feng Huang, Lin-Fang Wu, Sheng-Feng Chai, and Hong-Lin Cao
Am. J. Bot. 2010 97: e61-e62. Published online June 22, 2010; doi:10.3732/ajb.1000136 [Abstract][Full Text][PDF]
Sergio Currò, Marco Caruso, Gaetano Distefano, Alessandra Gentile, and Stefano La Malfa
Am. J. Bot. 2010 97: e58-e60. Published online June 16, 2010; doi:10.3732/ajb.1000143 [Abstract][Full Text][PDF]
From American Journal of Botany 97(6): 2010
Na-Na Xu, Shuo Yu, Jun-guo Zhang, Po Keung Eric Tsang, and Xiao-Yong Chen
Development, characterization, and transferability of microsatellite markers for Kirengeshoma palmata (Hydrangeaceae)
Am. J. Bot. 2010 97: e48-e51; doi:10.3732/ajb.1000134 [Abstract][Full Text][PDF]
Serena Terzoli, Isacco Beritognolo, Maurizio Sabatti, and Elena Kuzminsky
Am. J. Bot. 2010 97: e45-e47. Published online May 21, 2010; doi:10.3732/ajb.1000112 [Abstract][Full Text][PDF]
Andreas Homolka, Maria Berenyi, Kornel Burg, Dieter Kopecky, and Silvia Fluch
Am. J. Bot. 2010 97: e42-e44. Published online May 24, 2010; doi:10.3732/ajb.1000127 [Abstract][Full Text][PDF]
Yong Li, Lu Liang, and Xue-Jun Ge
Am. J. Bot. 2010 97: e39-e41. Published online May 7, 2010; doi:10.3732/ajb.1000098 [Abstract][Full Text][PDF]
From American Journal of Botany 97(5): 2010
Susan M. Kabat, Christopher W. Dick, and Mark D. Hunter
Am. J. Bot. 2010 97: e37-e38. Published online April 14, 2010; doi:10.3732/ajb.1000064 [Abstract][Full Text][PDF]
Kathrin Luettmann, Inga M. Michalczyk, Christina Mengel, Birgit Ziegenhagen, Eckhard W. Heymann, Pedro P. Pinedo Saboya, and Ronald Bialozyt
Am. J. Bot. 2010 97: e34-e36. Published online April 19, 2010; doi:10.3732/ajb.1000096 [Abstract][Full Text][PDF]
Jana Raabová, Guillaume Hans, Ange-Marie Risterucci, Anne-Laure Jacquemart, and Olivier Raspé
Am. J. Bot. 2010 97: e31-e33. Published online April 14, 2010; doi:10.3732/ajb.1000084 [Abstract][Full Text][PDF]
Juan M. Arroyo, Cristina Rigueiro, Rocío Rodríguez, Arndt Hampe, Alfredo Valido, Francisco Rodríguez-Sánchez, and Pedro Jordano
Am. J. Bot. 2010 97: e26-e30. Published online April 1, 2010; doi:10.3732/ajb.1000069 [Abstract][Full Text][PDF]
Rafael G. Albaladejo, Federico Sebastiani, Santiago C. González-Martínez, Juan P. González-Varo, Giovanni G. Vendramin, and Abelardo Aparicio
Am. J. Bot. 2010 97: e23-e25. Published online March 26, 2010; doi:10.3732/ajb.1000060 [Abstract][Full Text][PDF]
From American Journal of Botany 97(4): 2010
Jessica R. Brzyski
Am. J. Bot. 2010 97: e20-e22. Published online February 25, 2010, doi:10.3732/ajb.1000008 [Abstract][Full Text][PDF]
From American Journal of Botany 97(3): 2010
Mónica Arakaki, Douglas E. Soltis, Pamela S. Soltis, and Pablo R. Speranza
Am. J. Bot. 2010 97: e17-e19. Published online February 19, 2010; doi:10.3732/ajb.1000026 [Abstract][Full Text][PDF]
Yan Liu, Xue-Jun Ge, Qi-Bao Sun, and Tong Cao
Am. J. Bot. 2010 97: e14-e16. Published online February 16, 2010; doi:10.3732/ajb.1000014 [Abstract][Full Text][PDF]
Violeta I. Simón, F. Xavier Picó, and Juan Arroyo
Am. J. Bot. 2010 97: e10-e13. Published online February 19, 2010; doi:10.3732/ajb.1000023 [Abstract][Full Text][PDF]
Theresa M. Culley and J. Ryan Stewart
Am. J. Bot. 2010 97: e7-e9. Published online January 29, 2010; doi:10.3732/ajb.0900394 [Abstract][Full Text][PDF]
From American Journal of Botany 97(2): 2010
Sara López-Vinyallonga, Mónica Arakaki, Núria Garcia-Jacas, Alfonso Susanna, Matthew A. Gitzendanner, Douglas E. Soltis, and Pamela S. Soltis
Am. J. Bot. 2010 97: e4-e6. Published online January 15, 2010; doi:10.3732/ajb.0900376 [Abstract][Full Text][PDF]
From American Journal of Botany 97(1): 2010
Rachel Prunier and Andrew Latimer
Am. J. Bot. 2010 97: e1-e3. Published online December 11, 2009; doi:10.3732/ajb.0900326 [Abstract][Full Text][PDF]
Questions? Contact the Editorial Office American Journal of Botany
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